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Here's the workaround for making Sonia work in Linux:

Download the JSyn SDK:

http://www.softsynth.com/jsyn/developers/archives/jsyn142c_linux386_sdk.tar.gz

Unpack it and copy

jsyn142c_linux386_sdk/lib/libJSynV142 to the "code" folder for your sketch.
 

If JSyn is installed properly, you should only have three files in your sketch folder: the sketch (.pde) file, libJSynV142 under “code” and the sound file under “data”.

Just in case, the relevent entries in my library path are:

• /home/reed/sketchbook/Sonia_Tests/code
• /home/reed/Desktop/processing-0124/libraries/sonia_v2_9/library
• /home/reed/Desktop/processing-0124/java/lib/i386/client
• /home/reed/Desktop/processing-0124/java/lib/i386
• /home/reed/Desktop/processing-0124/java/../lib/i386

And in my class path:

• /home/reed/sketchbook/Sonia_Tests/code
• /home/reed/Desktop/processing-0124/libraries/candy/library
• /home/reed/Desktop/processing-0124/libraries/candy/library/candy.jar
• /home/reed/Desktop/processing-0124/libraries/dxf/library
• /home/reed/Desktop/processing-0124/libraries/dxf/library/dxf.jar
• /home/reed/Desktop/processing-0124/libraries/javascript/library
• /home/reed/Desktop/processing-0124/libraries/javascript/library/javascript.jar
• /home/reed/Desktop/processing-0124/libraries/net/library
• /home/reed/Desktop/processing-0124/libraries/net/library/net.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/opengl.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-macosx-ppc.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-windows-i586.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-linux-i586.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-macosx-universal.jar
• /home/reed/Desktop/processing-0124/libraries/pdf/library
• /home/reed/Desktop/processing-0124/libraries/pdf/library/pdf.jar
• /home/reed/Desktop/processing-0124/libraries/pdf/library/itext.jar
• /home/reed/Desktop/processing-0124/libraries/serial/library
• /home/reed/Desktop/processing-0124/libraries/serial/library/RXTXcomm.jar
• /home/reed/Desktop/processing-0124/libraries/serial/library/serial.jar
• /home/reed/Desktop/processing-0124/libraries/sonia_v2_9/library
• /home/reed/Desktop/processing-0124/libraries/sonia_v2_9/library/JSynClasses.jar
• /home/reed/Desktop/processing-0124/libraries/sonia_v2_9/library/sonia_v2_9.jar
• /home/reed/Desktop/processing-0124/libraries/xml/library
• /home/reed/Desktop/processing-0124/libraries/xml/library/xml.jar
• /home/reed/Desktop/processing-0124/libraries/candy/library
• /home/reed/Desktop/processing-0124/libraries/candy/library/candy.jar
• /home/reed/Desktop/processing-0124/libraries/dxf/library
• /home/reed/Desktop/processing-0124/libraries/dxf/library/dxf.jar
• /home/reed/Desktop/processing-0124/libraries/javascript/library
• /home/reed/Desktop/processing-0124/libraries/javascript/library/javascript.jar
• /home/reed/Desktop/processing-0124/libraries/net/library
• /home/reed/Desktop/processing-0124/libraries/net/library/net.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/opengl.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-macosx-ppc.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-windows-i586.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-linux-i586.jar
• /home/reed/Desktop/processing-0124/libraries/opengl/library/jogl-natives-macosx-universal.jar
• /home/reed/Desktop/processing-0124/libraries/pdf/library
• /home/reed/Desktop/processing-0124/libraries/pdf/library/pdf.jar
• /home/reed/Desktop/processing-0124/libraries/pdf/library/itext.jar
• /home/reed/Desktop/processing-0124/libraries/serial/library
• /home/reed/Desktop/processing-0124/libraries/serial/library/RXTXcomm.jar
• /home/reed/Desktop/processing-0124/libraries/serial/library/serial.jar
• /home/reed/Desktop/processing-0124/libraries/sonia_v2_9/library
• /home/reed/Desktop/processing-0124/libraries/sonia_v2_9/library/JSynClasses.jar
• /home/reed/Desktop/processing-0124/libraries/sonia_v2_9/library/sonia_v2_9.jar
• /home/reed/Desktop/processing-0124/libraries/xml/library
• /home/reed/Desktop/processing-0124/libraries/xml/library/xml.ja